STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TJ76Putative amidohydrolase protein. (177 aa)    
Predicted Functional Partners:
A0A1W2TK50
Putative glycerophosphodiester phosphodiesterase GDE1.
    
 0.804
A0A1W2TDQ7
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.799
A0A1W2TTV3
Putative U3 small nucleolar RNA-associated protein 20.
   
  0.574
A0A1W2TR71
Putative ankyrin repeat protein nuc-2.
    
  0.553
A0A1W2TUN7
Putative U3 small nucleolar RNA-associated protein 5.
    
  0.531
A0A1W2TWR3
Putative nucleolar protein 58.
    
  0.527
A0A1S7UKH1
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.526
A0A1W2TE69
Putative nucleolar complex protein 4.
    
  0.523
A0A1W2TJS6
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.523
A0A1W2TN88
Putative essential for mitotic growth 1.
    
  0.523
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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