STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TJW6Putative zinc finger domain-containing MIZ-type. (537 aa)    
Predicted Functional Partners:
A0A1W2TUZ5
Putative ubiquitin family protein.
    
 0.985
A0A1W2TRP4
Putative SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.982
A0A1W2TJV9
Putative bet3 family protein.
 
      0.878
A0A1W2TWA4
Putative ubiquitin-conjugating enzyme E2 35; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.844
A0A1W2TFD8
Putative chromosomal organization and DNA repair protein.
    
 
 0.843
A0A1S7UK05
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.837
A0A1S7UKK7
Putative proliferating cell nuclear antigen protein.
   
 
 0.837
A0A1W2TTK0
Putative E3 ubiquitin-protein ligase RAD18.
    
 
 0.834
A0A1S7UML4
Putative recombination protein rad52.
    
 
 0.792
A0A1S7UL03
Putative family decarboxylase.
    
 0.769
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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