STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TL59Putative homoaconitase. (145 aa)    
Predicted Functional Partners:
A0A1W2TU71
Putative homoisocitrate dehydrogenase.
   
 0.907
A0A1S7UIW7
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
 
  0.872
A0A1W2TDU4
Putative ulp1 protease family protein.
  
 
 0.852
A0A1W2TH79
Citrate synthase; Belongs to the citrate synthase family.
  
 0.810
A0A1W2TIF9
Citrate synthase; Belongs to the citrate synthase family.
  
 0.810
A0A1W2TPA9
Citrate synthase; Belongs to the citrate synthase family.
  
 0.810
A0A1W2TWD6
Citrate synthase; Belongs to the citrate synthase family.
  
 0.810
A0A1S7UJA5
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
 
  0.766
A0A1S7UJ71
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.760
A0A1W2TL66
Putative haloacid type II.
  
 0.760
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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