STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TLP5WHIM1 domain-containing protein. (606 aa)    
Predicted Functional Partners:
A0A1W2TJE6
Putative HECT-domain-containing protein.
   
 
 0.970
A0A1W2TLC1
Putative elongator complex protein 2.
 
      0.875
A0A1W2TPP6
Putative elongation factor 3.
   
   0.821
A0A1S8A9I9
Putative integral membrane protein.
   
 0.741
A0A1W2TCF0
Putative ubiquitin supergroup protein.
   
 0.741
A0A1W2TD24
Putative an1-type zinc finger protein.
   
 0.741
A0A1W2TFZ8
Putative polyubiquitin.
   
 0.741
A0A1S7UIX8
Putative ubiquitin-60S ribosomal protein L40.
    
 0.696
A0A1S8A4T2
Putative RNA polymerase I specific transcription initiation factor Rrn7.
    
 0.696
A0A1S8A4X0
Putative forms a complex with the other RRN protein RRN6 and RRN11.
    
 0.696
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.