STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TMA5Putative finger protein. (587 aa)    
Predicted Functional Partners:
A0A1S7UMU0
Putative sulphydryl oxidase.
  
 
 0.551
A0A1S7UHG6
Putative electron transfer flavoprotein subunit beta.
  
 
 0.534
A0A1W2THM2
Putative NADPH-dependent FMN reductase.
    
 0.508
A0A1W2TMM6
Putative galactonate dehydratase.
 
    
 0.494
A0A1W2TB44
Putative ferredoxin-NADP+ reductase.
    
  0.479
A0A1S7UKL8
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.472
A0A1W2TB45
Putative electron transfer flavoprotein subunit alpha.
   
 
 0.471
A0A1W2TGG6
Putative fumarate mitochondrial.
     
 0.467
A0A1W2THG3
Putative 2Fe-2S iron-sulfur cluster binding domain-containing protein.
    
 0.446
A0A1W2TSW9
Putative metallo-beta-lactamase family protein.
    
 0.446
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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