STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TMP3Putative duf1682 domain protein. (431 aa)    
Predicted Functional Partners:
A0A1W2TQ86
Plug_translocon domain-containing protein.
   
 
 0.892
A0A1W2TKF4
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
   0.847
A0A1W2TP62
Uncharacterized protein.
    
   0.840
A0A1S7UME0
Putative 60S ribosomal protein L5.
   
   0.834
A0A1S7ULG0
Putative 60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.830
A0A1W2TKK1
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.825
A0A1W2TDP0
Putative 60S ribosomal protein l11; Belongs to the universal ribosomal protein uL5 family.
   
   0.823
A0A1W2TI75
Putative 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.820
A0A1W2TG58
Putative 60S ribosomal protein L8.
   
   0.819
A0A1W2THF2
Uncharacterized protein.
   
   0.819
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.