STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TMU3Putative nuclear pore complex protein An-Nup82. (890 aa)    
Predicted Functional Partners:
A0A1W2TG79
Putative nucleoporin autopeptidase.
    
 0.951
A0A1W2TPI4
Putative nuclear pore complex subunit.
  
 
   0.917
A0A1W2TQT9
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
 
      0.868
A0A1W2TMB5
Putative major royal jelly protein.
    
  0.715
A0A1W2TQP0
Uncharacterized protein.
    
  0.715
A0A1W2TTF4
Putative nucleoporin nup49 nsp49 protein.
    
  0.715
A0A1W2TAU1
Putative WD domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.568
A0A1W2TBR7
SAS4 domain-containing protein.
  
  
  0.482
A0A1W2TDH4
Putative nucleoporin nsp1.
    
  0.451
A0A1W2TD26
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
  
  
  0.425
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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