STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TMX2Putative pre-mRNA-splicing factor syf2. (319 aa)    
Predicted Functional Partners:
A0A1S7UM91
Putative pre-mRNA-processing factor 17.
    
 0.999
A0A1W2TUX0
Putative cell cycle control protein.
    
 0.997
A0A1W2TV62
Putative pre-mRNA-splicing factor SLU7.
   
 0.996
A0A1W2TV68
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.996
A0A1W2TEL2
Putative cell cycle control protein.
   
 0.995
A0A1W2TDE4
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
 0.994
A0A1W2TP43
Putative pre-mRNA-splicing factor isy-1.
   
 
 0.990
A0A1S7UKF8
Putative pre-mRNA-splicing factor cef-1.
    
 
 0.989
A0A1S7UMA8
Putative pre-mRNA-splicing factor CWC25.
   
 0.989
A0A1W2TKD2
Putative elongation factor 2.
    
 
 0.989
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.