STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TNC4Ubiquitin carboxyl-terminal hydrolase. (498 aa)    
Predicted Functional Partners:
A0A1W2TDX1
Putative oocyte membrane protein.
   
 0.975
A0A1W2TPZ2
Putative von Willebrand factor type A domain-containing protein.
    
 0.972
A0A1S7UP48
Putative GANP Nin1 mts3 eIF-3 p25 family protein.
   
 0.964
A0A1W2TEC5
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.959
A0A1W2TI53
Putative 26S proteasome non-ATPase regulatory subunit 11.
   
 0.954
A0A1W2TKY3
Putative 26S proteasome regulatory subunit rpn-8.
   
 0.954
A0A1W2TT54
Proteasome subunit alpha type.
   
 0.954
A0A1W2TVZ8
Putative 26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 0.953
A0A1W2TGG9
Putative 26s proteasome non-atpase regulatory subunit 12.
   
 0.952
A0A1S7UP69
Putative 26s proteasome regulatory subunit rpn9 protein.
   
 0.950
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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