STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TNX0Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
A0A1W2TEG1
Putative anaphase-promoting complex component Cut20 Apc4.
    
  0.927
A0A1W2TQA2
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
 0.844
A0A1S8A5S2
Putative bub protein kinase.
    
   0.807
A0A1W2TDN4
Putative GMP synthase.
  
 
  0.792
A0A1W2TRP3
Putative asparagine synthetase.
     
 0.786
A0A1W2TS71
Amidophosphoribosyltransferase.
    
  0.766
A0A1S7UMS9
Putative glutamate-5-semialdehyde dehydrogenase.
    
 0.764
A0A1W2TB44
Putative ferredoxin-NADP+ reductase.
    
  0.764
A0A1S7ULV2
Putative ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.762
A0A1W2TW05
Aspartate aminotransferase.
     
 0.754
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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