Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| A0A1S7UM85 | A0A1S8A5P1 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | RAI1 domain-containing protein. | 0.495 |
| A0A1S7UM85 | A0A1S8A5T1 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | Uncharacterized protein. | 0.495 |
| A0A1S7UM85 | A0A1W2TP08 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.973 |
| A0A1S7UQA7 | A0A1W2TDZ0 | Putative ATP-dependent rRNA helicase rrp-3; Belongs to the DEAD box helicase family. | Putative Nop14-like family protein. | 0.980 |
| A0A1S7UQA7 | A0A1W2TNT7 | Putative ATP-dependent rRNA helicase rrp-3; Belongs to the DEAD box helicase family. | Putative BP28CT domain-containing protein. | 0.935 |
| A0A1S7UQA7 | A0A1W2TP08 | Putative ATP-dependent rRNA helicase rrp-3; Belongs to the DEAD box helicase family. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.789 |
| A0A1S7UQA7 | A0A1W2TTV3 | Putative ATP-dependent rRNA helicase rrp-3; Belongs to the DEAD box helicase family. | Putative U3 small nucleolar RNA-associated protein 20. | 0.966 |
| A0A1S8A5P1 | A0A1S7UM85 | RAI1 domain-containing protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.495 |
| A0A1S8A5P1 | A0A1S8A5T1 | RAI1 domain-containing protein. | Uncharacterized protein. | 0.933 |
| A0A1S8A5P1 | A0A1W2TP08 | RAI1 domain-containing protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.937 |
| A0A1S8A5P1 | A0A1W2TQU5 | RAI1 domain-containing protein. | Putative duf618 domain-containing protein. | 0.927 |
| A0A1S8A5T1 | A0A1S7UM85 | Uncharacterized protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.495 |
| A0A1S8A5T1 | A0A1S8A5P1 | Uncharacterized protein. | RAI1 domain-containing protein. | 0.933 |
| A0A1S8A5T1 | A0A1W2TP08 | Uncharacterized protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.937 |
| A0A1S8A5T1 | A0A1W2TQU5 | Uncharacterized protein. | Putative duf618 domain-containing protein. | 0.927 |
| A0A1W2TDZ0 | A0A1S7UQA7 | Putative Nop14-like family protein. | Putative ATP-dependent rRNA helicase rrp-3; Belongs to the DEAD box helicase family. | 0.980 |
| A0A1W2TDZ0 | A0A1W2TNT7 | Putative Nop14-like family protein. | Putative BP28CT domain-containing protein. | 0.996 |
| A0A1W2TDZ0 | A0A1W2TP08 | Putative Nop14-like family protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.774 |
| A0A1W2TDZ0 | A0A1W2TTV3 | Putative Nop14-like family protein. | Putative U3 small nucleolar RNA-associated protein 20. | 0.999 |
| A0A1W2TNT7 | A0A1S7UQA7 | Putative BP28CT domain-containing protein. | Putative ATP-dependent rRNA helicase rrp-3; Belongs to the DEAD box helicase family. | 0.935 |
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