STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TRP3Putative asparagine synthetase. (580 aa)    
Predicted Functional Partners:
A0A1W2TRP4
Putative SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
 
    
 0.909
A0A1W2THJ8
Aspartokinase.
  
 
 0.901
A0A1W2THD6
Aspartokinase.
  
 
 0.900
A0A1W2TG11
Homoserine dehydrogenase.
  
 
 0.898
A0A1W2TXF5
Putative mitochondrial outer membrane protein porin.
 
    
 0.888
A0A1W2TW05
Aspartate aminotransferase.
     
 0.875
A0A1W2TJM6
Putative L-asparaginase.
     
 0.842
A0A1W2TFL8
Uncharacterized protein.
    
 0.834
A0A1S7UJ25
Putative argininosuccinate synthase.
   
 0.825
A0A1S8A8G9
Putative argininosuccinate synthase.
   
 0.825
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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