STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TU80Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (236 aa)    
Predicted Functional Partners:
A0A1W2TCT4
Putative ESCRT-I component.
   
 0.999
A0A1W2TVX5
Putative vacuolar protein-sorting-associated protein 36.
    
 0.995
A0A1W2TRV4
Putative vacuolar protein-sorting-associated protein.
   
 0.993
A0A1W2TLW4
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.965
A0A1W2TL45
Putative snf7 family protein.
   
 0.951
A0A1W2TGX8
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
   0.944
A0A1W2TN03
Putative DOA4-independent degradation protein 4.
   
 0.926
A0A1W2TK26
Putative snf7 family protein.
   
 0.920
A0A1W2TV69
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.909
A0A1W2TCT8
Putative vacuolar-sorting protein SNF7.
     
 0.906
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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