STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TU82Putative alanyl-tRNA synthetase. (273 aa)    
Predicted Functional Partners:
A0A1W2TX00
Putative anaphase-promoting complex subunit 6.
   
 0.939
A0A1W2TEG1
Putative anaphase-promoting complex component Cut20 Apc4.
   
 0.937
A0A1W2TQG7
Putative anaphase-promoting complex subunit 1.
    
 0.935
A0A1W2TUZ3
Putative anaphase-promoting complex subunit 5.
   
 0.935
A0A1W2TKX4
Putative anaphase-promoting complex subunit 10.
    
 0.934
A0A1W2TPE2
Putative cullin family protein; Belongs to the cullin family.
    
 0.934
A0A1S7UIZ9
Putative mitotic spindle checkpoint component mad2.
    
 0.841
A0A1W2TBX7
Uncharacterized protein.
    
 0.832
A0A1W2TBY8
Putative anaphase-promoting complex subunit 11.
    
 0.832
A0A1S8A555
Putative checkpoint serine threonine-protein kinase bub1 protein.
    
 0.821
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.