STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TUB7Putative WD domain-containing protein. (990 aa)    
Predicted Functional Partners:
A0A1W2TRZ5
Putative catabolite repression protein creC.
    
 0.996
A0A1S8AAK7
Putative ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family.
    
 0.978
A0A1S8ABL2
Putative ubiquitin carboxyl-terminal hydrolase.
    
 0.978
A0A1W2TFZ8
Putative polyubiquitin.
    
  0.974
A0A1W2TJK3
Putative transcription factor bZIP.
    
  0.920
A0A1W2TVE1
Putative ubiquitin-40S ribosomal protein S27a.
    
  0.920
A0A1S8A4T2
Putative RNA polymerase I specific transcription initiation factor Rrn7.
    
  0.916
A0A1S8A4X0
Putative forms a complex with the other RRN protein RRN6 and RRN11.
    
  0.916
A0A1W2TV53
Putative ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family.
    
 0.900
A0A1S7UL23
Replication factor C subunit 1.
   
 0.894
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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