STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TUC4Putative amidase. (617 aa)    
Predicted Functional Partners:
A0A1W2TQA2
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.954
A0A1S7UMI8
Putative aspartyl-tRNA synthetase.
  
 0.832
A0A1W2TAI6
Putative heat shock protein 90.
  
 0.802
A0A1W2TPV4
Putative tuberous sclerosis 1.
  
 0.802
A0A1W2TVK9
Putative flavin reductase like domain-containing protein.
  
 0.802
A0A1S7UL10
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.789
A0A1W2TEP4
Putative glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.763
A0A1W2TDF6
Putative galactokinase.
  
 0.756
A0A1W2TCR4
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.754
A0A1S8A8X3
Putative 60S ribosomal protein L39.
  
 0.749
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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