STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TUF4Putative amino acid permease protein. (496 aa)    
Predicted Functional Partners:
A0A1S8A6P0
Putative zinc finger protein.
     
 0.874
A0A1S7UK48
Prohibitin.
     
 0.815
A0A1W2TD31
Prohibitin.
     
 0.777
A0A1S7UNY6
Putative mitochondrial inner membrane aaa protease.
     
 0.765
A0A1W2TKZ0
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
 
      0.742
A0A1W2TID8
Putative erythrocyte band 7 integral membrane protein.
     
 0.615
A0A1W2TJH7
Putative SPFH domain Band 7 family protein.
     
 0.615
A0A1W2TK63
Putative ATP-dependent metallopeptidase.
     
 0.557
A0A1S7UI31
Putative mitochondrial chaperone bcs1.
     
 0.539
A0A1S7UIN8
Putative BCS1-mitochondrial protein of the AAA family of ATPase; Belongs to the AAA ATPase family.
     
 0.539
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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