STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TV74Putative ribosomal RNA-processing protein 1. (314 aa)    
Predicted Functional Partners:
A0A1W2TUF7
Putative F-box domain-containing protein.
   
 
 0.996
A0A1W2TUT0
Putative electron transfer flavoprotein alpha-subunit.
   
 
 0.995
A0A1W2TLG0
Putative rRNA processing protein.
   
 
 0.994
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.994
A0A1S7UL82
Putative ribosomal biogenesis protein Gar2.
   
 
 0.993
A0A1W2TMX3
Putative ribosome production factor 1.
   
 
 0.993
A0A1W2TT69
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.992
A0A1W2THY9
Putative ribosome biogenesis protein RLP24.
   
 
 0.989
A0A1W2TNU0
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.989
A0A1S8A7R2
RNA helicase.
   
 
 0.987
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.