STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TWJ7Putative toxin biosynthesis. (330 aa)    
Predicted Functional Partners:
A0A1W2TDQ7
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.796
A0A1S7UK11
Putative yt521-b-like splicing.
    
  0.561
A0A1W2TG80
Uncharacterized protein.
    
  0.551
A0A1W2TEQ1
Putative 30S ribosomal protein mitochondrial.
    
  0.550
A0A1S7UI57
Putative mitochondrial ribosomal protein subunit s18.
    
  0.545
A0A1S7UTD5
Putative 37S ribosomal protein mrp4 protein.
   
  0.545
A0A1W2TWR9
Putative ribosomal protein S15.
   
  0.545
A0A1S7UJC3
Putative mitochondrial ribosomal small subunit component.
    
  0.544
A0A1W2TBX5
Putative 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
  0.544
A0A1W2TF87
Putative ribosomal protein S16.
    
  0.544
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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