STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TWT6Putative ubiquitin-like protein. (271 aa)    
Predicted Functional Partners:
A0A1S7UKE6
Putative sart-1 family protein.
    
 0.990
A0A1W2TLB0
Putative microfibril-associated protein.
    
 0.982
A0A1W2TP55
Putative prp38 family protein.
    
 0.981
A0A1W2TMQ7
Putative pre-mRNA-splicing factor spp42.
    
 
 0.978
A0A1S7UM91
Putative pre-mRNA-processing factor 17.
    
 0.942
A0A1W2TEA8
Putative mitosis protein dim1.
   
  0.938
A0A1S8A6F1
Putative heterokaryon incompatibility protein R.
    
 0.900
A0A1S7UII2
Putative PRP1 splicing factor.
    
 0.898
A0A1W2TFD2
Putative u1 zinc finger domain-containing protein.
    
  0.897
A0A1W2TGY6
Putative pwi domain mRNA processing protein.
    
  0.897
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.