STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W2TWX6Putative translation initiation factor IF-3. (326 aa)    
Predicted Functional Partners:
A0A1W2TSQ6
Putative translation initiation factor IF-2.
   
 0.756
A0A1S7UJC3
Putative mitochondrial ribosomal small subunit component.
   
 0.625
A0A1S7UKL1
Putative eukaryotic translation initiation factor 5B.
   
 0.585
A0A1W2TGS8
Putative mitochondrial ribosomal protein.
    
 0.569
A0A1S7UKE5
Putative 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
  0.561
A0A1W2THN6
Putative 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 0.554
A0A1S7UI57
Putative mitochondrial ribosomal protein subunit s18.
    
  0.551
A0A1W2TEQ1
Putative 30S ribosomal protein mitochondrial.
   
  0.549
A0A1W2TF87
Putative ribosomal protein S16.
    
  0.547
A0A1W2TGI5
Putative ribosomal protein S14p S29e.
    
  0.547
Your Current Organism:
Rosellinia necatrix
NCBI taxonomy Id: 77044
Other names: R. necatrix
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