STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ77582.1Quinol monooxygenase YgiN. (122 aa)    
Predicted Functional Partners:
SDZ77604.1
4-carboxymuconolactone decarboxylase.
 
  0.904
SDZ77564.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
     0.894
SDZ77627.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
    0.889
SDZ77660.1
Flavodoxin.
 
     0.740
SDZ77527.1
Helix-turn-helix domain-containing protein.
 
     0.695
SDZ77545.1
Predicted oxidoreductase.
  
 
  0.610
SEA01687.1
AraC-type DNA-binding protein.
  
     0.587
SEA25968.1
Helix-turn-helix domain-containing protein.
  
     0.512
SEA11883.1
Starch-binding associating with outer membrane.
  
    0.500
SEA11819.1
Putative DNA-binding response regulator/sensor histidine kinase; ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
 
  
 0.469
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.