STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ77660.1Flavodoxin. (185 aa)    
Predicted Functional Partners:
SDZ77604.1
4-carboxymuconolactone decarboxylase.
 
     0.883
SDZ77627.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
     0.825
SDZ77582.1
Quinol monooxygenase YgiN.
 
     0.740
nifJ
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.642
SEA09495.1
Multimeric flavodoxin WrbA.
 
  
  0.554
SDZ77243.1
NADPH-dependent FMN reductase.
 
  
  0.538
SDZ77677.1
Hypothetical protein.
       0.493
SDZ77545.1
Predicted oxidoreductase.
 
     0.490
SEA09786.1
Hypothetical protein.
  
    0.436
SDZ82504.1
Putative efflux protein, MATE family.
  
    0.435
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.