STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rprYDNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (232 aa)    
Predicted Functional Partners:
SDZ80679.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
  0.983
SEA60834.1
Signal transduction histidine kinase.
 
 0.887
SEA62710.1
Signal transduction histidine kinase.
  
 0.833
SEA09521.1
AraC-type DNA-binding protein.
  
  0.812
nuoCD
NADH-quinone oxidoreductase subunit C/D.
    
   0.808
SDZ88305.1
Two component regulator propeller.
  
  0.805
SEA11819.1
Putative DNA-binding response regulator/sensor histidine kinase; ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
  
0.714
SEA12043.1
Putative DNA-binding response regulator/sensor histidine kinase; ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
  
0.698
SEA26253.1
Two component regulator propeller.
  
0.682
SEA06942.1
Signal transduction histidine kinase.
  
0.660
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.