STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ83543.1Capsule assembly protein Wzi. (526 aa)    
Predicted Functional Partners:
SDZ83522.1
Lipocalin-like domain-containing protein.
       0.796
SEA18661.1
Protein of unknown function.
 
     0.728
SDZ95400.1
Family of unknown function.
  
     0.723
SEA39233.1
Hypothetical protein.
  
     0.694
SEA02294.1
Hypothetical protein.
  
     0.682
SEA52816.1
Tetratricopeptide repeat-containing protein.
  
     0.675
SEA34614.1
Protein of unknown function.
  
     0.641
SEA28719.1
Hypothetical protein.
  
 0.635
SEA55552.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.619
SDZ79566.1
Hypothetical protein.
 
   
 0.609
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.