Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ80087.1 | SDZ84286.1 | SAMN05216455_101318 | SAMN05216455_101517 | Ligand-binding sensor domain-containing protein. | Hypothetical protein. | 0.815 |
SDZ80087.1 | SEA05274.1 | SAMN05216455_101318 | SAMN05216455_1034 | Ligand-binding sensor domain-containing protein. | Two component regulator propeller. | 0.994 |
SDZ80087.1 | SEA06942.1 | SAMN05216455_101318 | SAMN05216455_10360 | Ligand-binding sensor domain-containing protein. | Signal transduction histidine kinase. | 0.995 |
SDZ80087.1 | SEA07003.1 | SAMN05216455_101318 | SAMN05216455_10362 | Ligand-binding sensor domain-containing protein. | AraC-type DNA-binding protein. | 0.994 |
SDZ80087.1 | SEA07921.1 | SAMN05216455_101318 | SAMN05216455_10392 | Ligand-binding sensor domain-containing protein. | Two component regulator propeller. | 0.994 |
SDZ80087.1 | SEA11819.1 | SAMN05216455_101318 | SAMN05216455_103229 | Ligand-binding sensor domain-containing protein. | Putative DNA-binding response regulator/sensor histidine kinase; ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.999 |
SDZ80087.1 | SEA26253.1 | SAMN05216455_101318 | SAMN05216455_10531 | Ligand-binding sensor domain-containing protein. | Two component regulator propeller. | 0.994 |
SDZ80087.1 | SEA27114.1 | SAMN05216455_101318 | SAMN05216455_10560 | Ligand-binding sensor domain-containing protein. | AraC-type DNA-binding protein. | 0.995 |
SDZ80087.1 | SEA28719.1 | SAMN05216455_101318 | SAMN05216455_105117 | Ligand-binding sensor domain-containing protein. | Hypothetical protein. | 0.570 |
SDZ80087.1 | SEA30009.1 | SAMN05216455_101318 | SAMN05216455_105160 | Ligand-binding sensor domain-containing protein. | AraC-type DNA-binding protein. | 0.995 |
SDZ84286.1 | SDZ80087.1 | SAMN05216455_101517 | SAMN05216455_101318 | Hypothetical protein. | Ligand-binding sensor domain-containing protein. | 0.815 |
SDZ84286.1 | SEA05274.1 | SAMN05216455_101517 | SAMN05216455_1034 | Hypothetical protein. | Two component regulator propeller. | 0.815 |
SDZ84286.1 | SEA06942.1 | SAMN05216455_101517 | SAMN05216455_10360 | Hypothetical protein. | Signal transduction histidine kinase. | 0.815 |
SDZ84286.1 | SEA07003.1 | SAMN05216455_101517 | SAMN05216455_10362 | Hypothetical protein. | AraC-type DNA-binding protein. | 0.815 |
SDZ84286.1 | SEA07921.1 | SAMN05216455_101517 | SAMN05216455_10392 | Hypothetical protein. | Two component regulator propeller. | 0.815 |
SDZ84286.1 | SEA11819.1 | SAMN05216455_101517 | SAMN05216455_103229 | Hypothetical protein. | Putative DNA-binding response regulator/sensor histidine kinase; ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain. | 0.814 |
SDZ84286.1 | SEA26253.1 | SAMN05216455_101517 | SAMN05216455_10531 | Hypothetical protein. | Two component regulator propeller. | 0.815 |
SDZ84286.1 | SEA27114.1 | SAMN05216455_101517 | SAMN05216455_10560 | Hypothetical protein. | AraC-type DNA-binding protein. | 0.815 |
SDZ84286.1 | SEA28719.1 | SAMN05216455_101517 | SAMN05216455_105117 | Hypothetical protein. | Hypothetical protein. | 0.818 |
SDZ84286.1 | SEA30009.1 | SAMN05216455_101517 | SAMN05216455_105160 | Hypothetical protein. | AraC-type DNA-binding protein. | 0.815 |
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