STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ87081.1AAA domain-containing protein, putative AbiEii toxin, Type IV TA system. (272 aa)    
Predicted Functional Partners:
SDZ87058.1
Protein of unknown function.
 
     0.957
SDZ85658.1
Peptidyl-prolyl cis-trans isomerase D.
  
     0.741
SEA36082.1
Hypothetical protein.
  
     0.738
SDZ84020.1
Protein of unknown function.
  
     0.737
SDZ88714.1
Esterase-like activity of phytase.
  
     0.716
SEA38399.1
PAP2 superfamily protein.
  
     0.716
SEA39703.1
Protein of unknown function.
  
     0.712
SEA55394.1
Long-chain fatty acid transport protein.
  
     0.702
SEA00931.1
Phosphate-selective porin O and P.
  
     0.693
SDZ87103.1
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.676
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.