Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ80338.1 | SDZ80401.1 | SAMN05216455_101331 | SAMN05216455_101334 | L-ribulose-5-phosphate 4-epimerase. | alpha-N-arabinofuranosidase. | 0.542 |
SDZ80338.1 | SDZ87312.1 | SAMN05216455_101331 | SAMN05216455_101659 | L-ribulose-5-phosphate 4-epimerase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.658 |
SDZ80338.1 | rhaB | SAMN05216455_101331 | SAMN05216455_101655 | L-ribulose-5-phosphate 4-epimerase. | Rhamnulokinase. | 0.436 |
SDZ80401.1 | SDZ80338.1 | SAMN05216455_101334 | SAMN05216455_101331 | alpha-N-arabinofuranosidase. | L-ribulose-5-phosphate 4-epimerase. | 0.542 |
SDZ80401.1 | SDZ87312.1 | SAMN05216455_101334 | SAMN05216455_101659 | alpha-N-arabinofuranosidase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.491 |
SDZ87257.1 | SDZ87289.1 | SAMN05216455_101657 | SAMN05216455_101658 | MFS transporter, SP family, inositol transporter. | Rhamnulose-1-phosphate aldolase. | 0.865 |
SDZ87257.1 | SDZ87312.1 | SAMN05216455_101657 | SAMN05216455_101659 | MFS transporter, SP family, inositol transporter. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.515 |
SDZ87257.1 | rhaA | SAMN05216455_101657 | SAMN05216455_101656 | MFS transporter, SP family, inositol transporter. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.927 |
SDZ87257.1 | rhaB | SAMN05216455_101657 | SAMN05216455_101655 | MFS transporter, SP family, inositol transporter. | Rhamnulokinase. | 0.796 |
SDZ87257.1 | rhaU | SAMN05216455_101657 | SAMN05216455_10847 | MFS transporter, SP family, inositol transporter. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.682 |
SDZ87289.1 | SDZ87257.1 | SAMN05216455_101658 | SAMN05216455_101657 | Rhamnulose-1-phosphate aldolase. | MFS transporter, SP family, inositol transporter. | 0.865 |
SDZ87289.1 | SDZ87312.1 | SAMN05216455_101658 | SAMN05216455_101659 | Rhamnulose-1-phosphate aldolase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.870 |
SDZ87289.1 | SEA26747.1 | SAMN05216455_101658 | SAMN05216455_10548 | Rhamnulose-1-phosphate aldolase. | Alpha-L-rhamnosidase N-terminal domain-containing protein. | 0.412 |
SDZ87289.1 | SEA26868.1 | SAMN05216455_101658 | SAMN05216455_10552 | Rhamnulose-1-phosphate aldolase. | alpha-L-rhamnosidase. | 0.426 |
SDZ87289.1 | rhaA | SAMN05216455_101658 | SAMN05216455_101656 | Rhamnulose-1-phosphate aldolase. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.925 |
SDZ87289.1 | rhaB | SAMN05216455_101658 | SAMN05216455_101655 | Rhamnulose-1-phosphate aldolase. | Rhamnulokinase. | 0.980 |
SDZ87289.1 | rhaU | SAMN05216455_101658 | SAMN05216455_10847 | Rhamnulose-1-phosphate aldolase. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.632 |
SDZ87312.1 | SDZ80338.1 | SAMN05216455_101659 | SAMN05216455_101331 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulose-5-phosphate 4-epimerase. | 0.658 |
SDZ87312.1 | SDZ80401.1 | SAMN05216455_101659 | SAMN05216455_101334 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | alpha-N-arabinofuranosidase. | 0.491 |
SDZ87312.1 | SDZ87257.1 | SAMN05216455_101659 | SAMN05216455_101657 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | MFS transporter, SP family, inositol transporter. | 0.515 |
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