STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ87570.1ATP-dependent DNA helicase RecG. (494 aa)    
Predicted Functional Partners:
SDZ87556.1
Putative DNA-binding domain-containing protein.
 
 
  0.895
SDZ87585.1
Helix-turn-helix.
       0.772
SEA47866.1
Hypothetical protein.
  
     0.708
SDZ77495.1
Hypothetical protein.
  
     0.700
SDZ87510.1
Hypothetical protein.
       0.648
SDZ87541.1
Hypothetical protein.
       0.648
SDZ87490.1
TIR domain-containing protein.
       0.623
SDZ87465.1
Diadenosine tetraphosphate (Ap4A) hydrolase.
       0.606
SDZ87444.1
HNH endonuclease.
       0.598
SEA61587.1
Hypothetical protein.
  
     0.594
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.