STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ99400.1Glycosyltransferase involved in cell wall bisynthesis. (318 aa)    
Predicted Functional Partners:
SDZ99429.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.857
SDZ99229.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.831
SDZ99287.1
Nucleoside-diphosphate-sugar epimerase.
 
 
  0.812
SDZ99347.1
Na+-driven multidrug efflux pump.
  
    0.801
SDZ99457.1
Glycosyl transferase family 2.
 
    
0.795
SDZ99373.1
Glycosyltransferase WbsX.
  
    0.780
SDZ99317.1
Lipopolysaccharide cholinephosphotransferase.
       0.773
SEA57732.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.773
SEA29254.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.764
SDZ99256.1
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
       0.762
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.