STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA21848.1Protein of unknown function. (507 aa)    
Predicted Functional Partners:
SEA21820.1
Hypothetical protein.
       0.842
SEA39233.1
Hypothetical protein.
  
    0.785
SEA21882.1
Starch synthase.
  
    0.776
SDZ74399.1
Putative porin.
  
     0.774
SDZ81093.1
Sporulation related domain-containing protein.
  
     0.773
SEA00692.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.773
SEA34859.1
Hypothetical protein.
  
     0.773
SEA34614.1
Protein of unknown function.
  
     0.772
SEA55445.1
Outer membrane autotransporter barrel domain-containing protein.
  
     0.768
SEA39703.1
Protein of unknown function.
  
     0.767
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.