STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA26928.1Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family. (1281 aa)    
Predicted Functional Partners:
SEA26895.1
Glycosyl hydrolase family 20, domain 2.
 
     0.902
SEA26868.1
alpha-L-rhamnosidase.
 
     0.865
SEA26838.1
Putative collagen-binding domain of a collagenase.
 
 
  0.860
SEA27141.1
Sugar phosphate isomerase/epimerase.
 
  
  0.854
SEA27014.1
alpha-L-rhamnosidase.
    0.853
SEA27193.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.796
SEA27219.1
Starch-binding associating with outer membrane.
 
  
  0.795
SEA26713.1
Trehalase.
  
     0.774
SEA27343.1
Hypothetical protein.
  
  
  0.773
SEA43711.1
alpha-L-rhamnosidase.
  
     0.771
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.