STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA42873.1Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain. (156 aa)    
Predicted Functional Partners:
SEA42897.1
Predicted acyltransferase, LPLAT superfamily.
 
   
 0.964
SEA42735.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
 
  0.957
SEA42844.1
Acyl carrier protein.
 
     0.942
SEA27667.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
 
  0.936
SEA42953.1
Methyltransferase domain-containing protein.
 
     0.924
SEA42785.1
Beta-ketoacyl synthase, N-terminal domain.
 
  
 0.913
SEA42703.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.882
lpxC
3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
   
  0.877
acpP-3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
     0.877
SEA42673.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
  
 0.869
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.