STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA45941.1Hypothetical protein. (520 aa)    
Predicted Functional Partners:
SEA28488.1
heptose-I-phosphate ethanolaminephosphotransferase.
  
     0.740
SEA34859.1
Hypothetical protein.
  
     0.699
SDZ75657.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.693
SEA19964.1
Hypothetical protein.
  
     0.661
SDZ74566.1
Zinc-ribbon domain-containing protein.
  
     0.652
SEA51825.1
Iron complex outermembrane recepter protein.
  
     0.634
SEA62972.1
Protein of unknown function.
  
     0.616
SEA17851.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
  
     0.614
SEA45965.1
Thiol-disulfide isomerase or thioredoxin.
       0.613
SEA45992.1
Protein of unknown function.
       0.613
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.