Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ84286.1 | SEA47266.1 | SAMN05216455_101517 | SAMN05216455_107205 | Hypothetical protein. | Cell wall-active antibiotics response 4TMS YvqF. | 0.726 |
SEA01018.1 | SEA05737.1 | SAMN05216455_102246 | SAMN05216455_10320 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Protein of unknown function. | 0.649 |
SEA01018.1 | SEA11902.1 | SAMN05216455_102246 | SAMN05216455_103232 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Protein of unknown function. | 0.704 |
SEA01018.1 | SEA11933.1 | SAMN05216455_102246 | SAMN05216455_103233 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Beta-fructofuranosidase. | 0.745 |
SEA01018.1 | SEA47132.1 | SAMN05216455_102246 | SAMN05216455_107199 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | AraC-type DNA-binding protein. | 0.713 |
SEA01018.1 | SEA47241.1 | SAMN05216455_102246 | SAMN05216455_107204 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Outer membrane receptor proteins, mostly Fe transport. | 0.707 |
SEA01018.1 | SEA47266.1 | SAMN05216455_102246 | SAMN05216455_107205 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Cell wall-active antibiotics response 4TMS YvqF. | 0.727 |
SEA01018.1 | SEA47286.1 | SAMN05216455_102246 | SAMN05216455_107206 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Transcriptional regulator, LytTR family. | 0.691 |
SEA01018.1 | SEA59257.1 | SAMN05216455_102246 | SAMN05216455_109101 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Outer membrane receptor proteins, mostly Fe transport. | 0.680 |
SEA01237.1 | SEA05737.1 | SAMN05216455_102254 | SAMN05216455_10320 | WYL domain-containing protein. | Protein of unknown function. | 0.469 |
SEA01237.1 | SEA11902.1 | SAMN05216455_102254 | SAMN05216455_103232 | WYL domain-containing protein. | Protein of unknown function. | 0.593 |
SEA01237.1 | SEA11933.1 | SAMN05216455_102254 | SAMN05216455_103233 | WYL domain-containing protein. | Beta-fructofuranosidase. | 0.711 |
SEA01237.1 | SEA47132.1 | SAMN05216455_102254 | SAMN05216455_107199 | WYL domain-containing protein. | AraC-type DNA-binding protein. | 0.655 |
SEA01237.1 | SEA47241.1 | SAMN05216455_102254 | SAMN05216455_107204 | WYL domain-containing protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.702 |
SEA01237.1 | SEA47266.1 | SAMN05216455_102254 | SAMN05216455_107205 | WYL domain-containing protein. | Cell wall-active antibiotics response 4TMS YvqF. | 0.718 |
SEA01237.1 | SEA47286.1 | SAMN05216455_102254 | SAMN05216455_107206 | WYL domain-containing protein. | Transcriptional regulator, LytTR family. | 0.570 |
SEA01237.1 | SEA59257.1 | SAMN05216455_102254 | SAMN05216455_109101 | WYL domain-containing protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.635 |
SEA05737.1 | SEA01018.1 | SAMN05216455_10320 | SAMN05216455_102246 | Protein of unknown function. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.649 |
SEA05737.1 | SEA01237.1 | SAMN05216455_10320 | SAMN05216455_102254 | Protein of unknown function. | WYL domain-containing protein. | 0.469 |
SEA05737.1 | SEA11902.1 | SAMN05216455_10320 | SAMN05216455_103232 | Protein of unknown function. | Protein of unknown function. | 0.609 |
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