STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA47514.1Cupin domain-containing protein. (152 aa)    
Predicted Functional Partners:
SEA47532.1
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
     0.807
SEA47558.1
Phosphoserine phosphatase.
       0.668
SEA47132.1
AraC-type DNA-binding protein.
  
   0.649
SEA11933.1
Beta-fructofuranosidase.
  
     0.588
SEA47582.1
Cyclohexadienyl dehydratase.
  
  
 0.573
SEA59257.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.539
SEA47241.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.530
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.521
SEA47266.1
Cell wall-active antibiotics response 4TMS YvqF.
  
     0.518
SEA11902.1
Protein of unknown function.
  
     0.503
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.