STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA44020.1Hypothetical protein. (832 aa)    
Predicted Functional Partners:
SEA44921.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family.
     0.745
SEA46548.1
Carbohydrate binding module (family 6).
 
     0.742
SEA30163.1
Arabinan endo-1,5-alpha-L-arabinosidase.
  
     0.739
SDZ78438.1
Hypothetical protein.
 
     0.736
SEA64620.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
  
     0.727
SEA51729.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
  
     0.725
SDZ80401.1
alpha-N-arabinofuranosidase.
 
    0.668
SDZ81751.1
Alpha-L-arabinofuranosidase C-terminus.
 
     0.654
SEA28133.1
Hypothetical protein.
 
     0.649
SEA11351.1
Alpha-L-arabinofuranosidase.
 
     0.648
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.