Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ95066.1 | SEA44549.1 | SAMN05216455_10239 | SAMN05216455_10785 | Hypothetical protein. | CRISPR-associated protein, Cas2 family. | 0.628 |
SDZ95066.1 | SEA45168.1 | SAMN05216455_10239 | SAMN05216455_107111 | Hypothetical protein. | Group II intron reverse transcriptase/maturase. | 0.615 |
SEA44549.1 | SDZ95066.1 | SAMN05216455_10785 | SAMN05216455_10239 | CRISPR-associated protein, Cas2 family. | Hypothetical protein. | 0.628 |
SEA44549.1 | SEA44568.1 | SAMN05216455_10785 | SAMN05216455_10786 | CRISPR-associated protein, Cas2 family. | CRISP-associated protein Cas1. | 0.999 |
SEA44549.1 | SEA44591.1 | SAMN05216455_10785 | SAMN05216455_10787 | CRISPR-associated protein, Cas2 family. | CRISPR-associated endonuclease Csn1. | 0.964 |
SEA44549.1 | SEA45168.1 | SAMN05216455_10785 | SAMN05216455_107111 | CRISPR-associated protein, Cas2 family. | Group II intron reverse transcriptase/maturase. | 0.628 |
SEA44549.1 | SEA46906.1 | SAMN05216455_10785 | SAMN05216455_107190 | CRISPR-associated protein, Cas2 family. | DNA-binding protein, histone-like, putative. | 0.472 |
SEA44568.1 | SEA44549.1 | SAMN05216455_10786 | SAMN05216455_10785 | CRISP-associated protein Cas1. | CRISPR-associated protein, Cas2 family. | 0.999 |
SEA44568.1 | SEA44591.1 | SAMN05216455_10786 | SAMN05216455_10787 | CRISP-associated protein Cas1. | CRISPR-associated endonuclease Csn1. | 0.969 |
SEA44568.1 | SEA46906.1 | SAMN05216455_10786 | SAMN05216455_107190 | CRISP-associated protein Cas1. | DNA-binding protein, histone-like, putative. | 0.525 |
SEA44591.1 | SEA44549.1 | SAMN05216455_10787 | SAMN05216455_10785 | CRISPR-associated endonuclease Csn1. | CRISPR-associated protein, Cas2 family. | 0.964 |
SEA44591.1 | SEA44568.1 | SAMN05216455_10787 | SAMN05216455_10786 | CRISPR-associated endonuclease Csn1. | CRISP-associated protein Cas1. | 0.969 |
SEA45168.1 | SDZ95066.1 | SAMN05216455_107111 | SAMN05216455_10239 | Group II intron reverse transcriptase/maturase. | Hypothetical protein. | 0.615 |
SEA45168.1 | SEA44549.1 | SAMN05216455_107111 | SAMN05216455_10785 | Group II intron reverse transcriptase/maturase. | CRISPR-associated protein, Cas2 family. | 0.628 |
SEA46906.1 | SEA44549.1 | SAMN05216455_107190 | SAMN05216455_10785 | DNA-binding protein, histone-like, putative. | CRISPR-associated protein, Cas2 family. | 0.472 |
SEA46906.1 | SEA44568.1 | SAMN05216455_107190 | SAMN05216455_10786 | DNA-binding protein, histone-like, putative. | CRISP-associated protein Cas1. | 0.525 |