STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA44549.1CRISPR-associated protein, Cas2 family. (101 aa)    
Predicted Functional Partners:
SEA44568.1
CRISP-associated protein Cas1.
 
 
 0.999
SEA44591.1
CRISPR-associated endonuclease Csn1.
 
   
 0.964
SDZ95066.1
Hypothetical protein.
   
 
 0.628
SEA45168.1
Group II intron reverse transcriptase/maturase.
   
 
 0.628
SEA46906.1
DNA-binding protein, histone-like, putative.
  
 
   0.472
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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