Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ85948.1 | SEA52175.1 | SAMN05216455_101595 | SAMN05216455_10858 | Protein of unknown function. | GSCFA family protein. | 0.574 |
SDZ85948.1 | SEA52202.1 | SAMN05216455_101595 | SAMN05216455_10859 | Protein of unknown function. | Membrane protein YfhO. | 0.515 |
SDZ97676.1 | SEA17898.1 | SAMN05216455_102128 | SAMN05216455_104105 | Rhamnogalacturonan endolyase. | alpha-L-rhamnosidase. | 0.674 |
SDZ97676.1 | SEA27014.1 | SAMN05216455_102128 | SAMN05216455_10557 | Rhamnogalacturonan endolyase. | alpha-L-rhamnosidase. | 0.553 |
SDZ97676.1 | SEA52175.1 | SAMN05216455_102128 | SAMN05216455_10858 | Rhamnogalacturonan endolyase. | GSCFA family protein. | 0.576 |
SDZ97676.1 | SEA61232.1 | SAMN05216455_102128 | SAMN05216455_11020 | Rhamnogalacturonan endolyase. | GDSL-like Lipase/Acylhydrolase family protein. | 0.806 |
SDZ98420.1 | SEA17898.1 | SAMN05216455_102153 | SAMN05216455_104105 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | alpha-L-rhamnosidase. | 0.470 |
SDZ98420.1 | SEA52175.1 | SAMN05216455_102153 | SAMN05216455_10858 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | GSCFA family protein. | 0.581 |
SDZ98420.1 | SEA61232.1 | SAMN05216455_102153 | SAMN05216455_11020 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | GDSL-like Lipase/Acylhydrolase family protein. | 0.948 |
SEA11572.1 | SEA17898.1 | SAMN05216455_103220 | SAMN05216455_104105 | Rhamnogalacturonan endolyase. | alpha-L-rhamnosidase. | 0.658 |
SEA11572.1 | SEA27014.1 | SAMN05216455_103220 | SAMN05216455_10557 | Rhamnogalacturonan endolyase. | alpha-L-rhamnosidase. | 0.553 |
SEA11572.1 | SEA52175.1 | SAMN05216455_103220 | SAMN05216455_10858 | Rhamnogalacturonan endolyase. | GSCFA family protein. | 0.577 |
SEA11572.1 | SEA61232.1 | SAMN05216455_103220 | SAMN05216455_11020 | Rhamnogalacturonan endolyase. | GDSL-like Lipase/Acylhydrolase family protein. | 0.761 |
SEA17898.1 | SDZ97676.1 | SAMN05216455_104105 | SAMN05216455_102128 | alpha-L-rhamnosidase. | Rhamnogalacturonan endolyase. | 0.674 |
SEA17898.1 | SDZ98420.1 | SAMN05216455_104105 | SAMN05216455_102153 | alpha-L-rhamnosidase. | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | 0.470 |
SEA17898.1 | SEA11572.1 | SAMN05216455_104105 | SAMN05216455_103220 | alpha-L-rhamnosidase. | Rhamnogalacturonan endolyase. | 0.658 |
SEA17898.1 | SEA52175.1 | SAMN05216455_104105 | SAMN05216455_10858 | alpha-L-rhamnosidase. | GSCFA family protein. | 0.560 |
SEA17898.1 | SEA61232.1 | SAMN05216455_104105 | SAMN05216455_11020 | alpha-L-rhamnosidase. | GDSL-like Lipase/Acylhydrolase family protein. | 0.793 |
SEA27014.1 | SDZ97676.1 | SAMN05216455_10557 | SAMN05216455_102128 | alpha-L-rhamnosidase. | Rhamnogalacturonan endolyase. | 0.553 |
SEA27014.1 | SEA11572.1 | SAMN05216455_10557 | SAMN05216455_103220 | alpha-L-rhamnosidase. | Rhamnogalacturonan endolyase. | 0.553 |
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