STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA58369.1Capsular exopolysaccharide family. (798 aa)    
Predicted Functional Partners:
SEA57153.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.999
SEA58352.1
Polysaccharide export outer membrane protein.
 
 0.996
SEA19513.1
Polysaccharide export outer membrane protein.
 
 0.991
SEA20906.1
Polysaccharide export outer membrane protein.
 
 0.991
SDZ83254.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
 0.969
SEA57079.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
 0.969
SEA57132.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
 0.969
nuoCD
NADH-quinone oxidoreductase subunit C/D.
     
 0.958
SEA58390.1
Tyrosine-protein phosphatase YwqE.
 
  
 0.937
SDZ83497.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.927
Your Current Organism:
Prevotella bryantii
NCBI taxonomy Id: 77095
Other names: Bacteroides (Prevotella) ruminicola subsp. brevis biovar 3, CIP 105474, DSM 11371, P. bryantii, strain B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.