STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN64412.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (280 aa)    
Predicted Functional Partners:
SEN64446.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.999
SEN64474.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.998
SEN64507.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.996
SEO31429.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.992
SEO31412.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.987
ugpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.946
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
  
 
0.935
SEN73885.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.934
SEN88723.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.933
SEN76851.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.925
Your Current Organism:
Halomonas aquamarina
NCBI taxonomy Id: 77097
Other names: ATCC 14400, Achromobacter aquamarinus, Alcaligenes aestus, Alcaligenes aquamarinus, Bacterium aquamarinum, CCUG 16157, CIP 105454, DSM 30161, Deleya aesta, Deleya aquamarina, Deleya aquimarina, H. aquamarina, IAM 12550, KCTC 22193, LMG 2853, LMG:2853, NCIMB 557, strain 558, strain ZoBell and Upham 558
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