STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN66492.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. (279 aa)    
Predicted Functional Partners:
SEN66412.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 0.999
SEN66456.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 0.999
SEN66530.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.999
SEN66563.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.999
SEN66230.1
acyl-CoA thioesterase.
 
 
 0.989
SEN66600.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
  
 0.964
SEN66152.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 
 
 0.949
SEN66301.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.929
SEN06070.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
  
 
 0.909
SEN66385.1
AMP-binding enzyme C-terminal domain-containing protein.
 
 
 0.898
Your Current Organism:
Halomonas aquamarina
NCBI taxonomy Id: 77097
Other names: ATCC 14400, Achromobacter aquamarinus, Alcaligenes aestus, Alcaligenes aquamarinus, Bacterium aquamarinum, CCUG 16157, CIP 105454, DSM 30161, Deleya aesta, Deleya aquamarina, Deleya aquimarina, H. aquamarina, IAM 12550, KCTC 22193, LMG 2853, LMG:2853, NCIMB 557, strain 558, strain ZoBell and Upham 558
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