STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN88860.1Transcriptional regulator, LacI family. (324 aa)    
Predicted Functional Partners:
SEN88883.1
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
 
 
 
 0.981
SEN90409.1
Glutamate synthase (NADPH) large subunit.
    
 
 0.919
SEN88941.1
PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
 
   
 0.795
SEN88273.1
Fructan beta-fructosidase.
  
 
 0.790
SEN88912.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
   
 0.786
SEN71945.1
Transcriptional regulator, LacI family.
  
     0.753
SEN73631.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.635
SEN88754.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.632
SEN47968.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.631
SEN47931.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 
 0.603
Your Current Organism:
Halomonas aquamarina
NCBI taxonomy Id: 77097
Other names: ATCC 14400, Achromobacter aquamarinus, Alcaligenes aestus, Alcaligenes aquamarinus, Bacterium aquamarinum, CCUG 16157, CIP 105454, DSM 30161, Deleya aesta, Deleya aquamarina, Deleya aquimarina, H. aquamarina, IAM 12550, KCTC 22193, LMG 2853, LMG:2853, NCIMB 557, strain 558, strain ZoBell and Upham 558
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