STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO07447.1Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (281 aa)    
Predicted Functional Partners:
SEO07478.1
Type IV pilus assembly protein PilC.
 
  
 0.983
SEO33165.1
Type IV pilus assembly protein PilB.
 
 
 0.958
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.882
SEO33122.1
Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.
 
  
 0.863
SEO33091.1
Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.
 
  
 0.840
SEN52051.1
DNA protecting protein DprA.
 
  
 0.834
SEO45512.1
Twitching motility protein PilU.
  
   
 0.824
SEO45481.1
Pilus retraction ATPase PilT.
 
   
 0.819
SEO33132.1
Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.
 
  
 0.816
SEN40039.1
Competence protein ComEC.
 
  
 0.815
Your Current Organism:
Halomonas aquamarina
NCBI taxonomy Id: 77097
Other names: ATCC 14400, Achromobacter aquamarinus, Alcaligenes aestus, Alcaligenes aquamarinus, Bacterium aquamarinum, CCUG 16157, CIP 105454, DSM 30161, Deleya aesta, Deleya aquamarina, Deleya aquimarina, H. aquamarina, IAM 12550, KCTC 22193, LMG 2853, LMG:2853, NCIMB 557, strain 558, strain ZoBell and Upham 558
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.