STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO25517.1Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (136 aa)    
Predicted Functional Partners:
SEO25468.1
Arsenite transporter, ACR3 family.
 
  
 0.915
SEO12016.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
 
 0.829
SEN16652.1
Thioredoxin.
  
 
 0.823
SEO15441.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.823
SEO14453.1
Acyl transferase domain-containing protein.
  
 0.813
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.784
SEO25486.1
Arsenical resistance protein ArsH.
 
   
 0.778
SEN85097.1
Arsenite efflux pump ArsB, ACR3 family.
  
  
 0.775
SEO25543.1
Methyl-accepting chemotaxis protein.
    
  0.760
SEO25415.1
Arsenate reductase.
  
  
 0.742
Your Current Organism:
Halomonas aquamarina
NCBI taxonomy Id: 77097
Other names: ATCC 14400, Achromobacter aquamarinus, Alcaligenes aestus, Alcaligenes aquamarinus, Bacterium aquamarinum, CCUG 16157, CIP 105454, DSM 30161, Deleya aesta, Deleya aquamarina, Deleya aquimarina, H. aquamarina, IAM 12550, KCTC 22193, LMG 2853, LMG:2853, NCIMB 557, strain 558, strain ZoBell and Upham 558
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