Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN16652.1 | SEO14453.1 | SAMN04490369_100419 | SAMN04490369_104810 | Thioredoxin. | Acyl transferase domain-containing protein. | 0.497 |
SEN16652.1 | SEO25517.1 | SAMN04490369_100419 | SAMN04490369_106015 | Thioredoxin. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.823 |
SEN85097.1 | SEO25517.1 | SAMN04490369_102718 | SAMN04490369_106015 | Arsenite efflux pump ArsB, ACR3 family. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.775 |
SEO12016.1 | SEO14453.1 | SAMN04490369_104614 | SAMN04490369_104810 | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | Acyl transferase domain-containing protein. | 0.732 |
SEO12016.1 | SEO25517.1 | SAMN04490369_104614 | SAMN04490369_106015 | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.829 |
SEO14453.1 | SEN16652.1 | SAMN04490369_104810 | SAMN04490369_100419 | Acyl transferase domain-containing protein. | Thioredoxin. | 0.497 |
SEO14453.1 | SEO12016.1 | SAMN04490369_104810 | SAMN04490369_104614 | Acyl transferase domain-containing protein. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.732 |
SEO14453.1 | SEO15441.1 | SAMN04490369_104810 | SAMN04490369_10499 | Acyl transferase domain-containing protein. | Thioredoxin; Belongs to the thioredoxin family. | 0.497 |
SEO14453.1 | SEO25517.1 | SAMN04490369_104810 | SAMN04490369_106015 | Acyl transferase domain-containing protein. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.813 |
SEO14453.1 | argA | SAMN04490369_104810 | SAMN04490369_102736 | Acyl transferase domain-containing protein. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.598 |
SEO15441.1 | SEO14453.1 | SAMN04490369_10499 | SAMN04490369_104810 | Thioredoxin; Belongs to the thioredoxin family. | Acyl transferase domain-containing protein. | 0.497 |
SEO15441.1 | SEO25517.1 | SAMN04490369_10499 | SAMN04490369_106015 | Thioredoxin; Belongs to the thioredoxin family. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.823 |
SEO25415.1 | SEO25468.1 | SAMN04490369_106011 | SAMN04490369_106013 | Arsenate reductase. | Arsenite transporter, ACR3 family. | 0.873 |
SEO25415.1 | SEO25486.1 | SAMN04490369_106011 | SAMN04490369_106014 | Arsenate reductase. | Arsenical resistance protein ArsH. | 0.894 |
SEO25415.1 | SEO25517.1 | SAMN04490369_106011 | SAMN04490369_106015 | Arsenate reductase. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.742 |
SEO25415.1 | SEO25543.1 | SAMN04490369_106011 | SAMN04490369_106016 | Arsenate reductase. | Methyl-accepting chemotaxis protein. | 0.513 |
SEO25468.1 | SEO25415.1 | SAMN04490369_106013 | SAMN04490369_106011 | Arsenite transporter, ACR3 family. | Arsenate reductase. | 0.873 |
SEO25468.1 | SEO25486.1 | SAMN04490369_106013 | SAMN04490369_106014 | Arsenite transporter, ACR3 family. | Arsenical resistance protein ArsH. | 0.871 |
SEO25468.1 | SEO25517.1 | SAMN04490369_106013 | SAMN04490369_106015 | Arsenite transporter, ACR3 family. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.915 |
SEO25468.1 | SEO25543.1 | SAMN04490369_106013 | SAMN04490369_106016 | Arsenite transporter, ACR3 family. | Methyl-accepting chemotaxis protein. | 0.556 |
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