Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D910_03410 | D910_03602 | N6U3I6 | U4TX49 | Uncharacterized protein. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.637 |
D910_03410 | D910_03914 | N6U3I6 | U4U997 | Uncharacterized protein. | Uncharacterized protein. | 0.813 |
D910_03410 | D910_03980 | N6U3I6 | U4U2M7 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.871 |
D910_03410 | D910_04498 | N6U3I6 | N6U3V1 | Uncharacterized protein. | Uncharacterized protein. | 0.568 |
D910_03410 | D910_04883 | N6U3I6 | N6U8U7 | Uncharacterized protein. | Uncharacterized protein. | 0.538 |
D910_03410 | D910_06344 | N6U3I6 | N6UF97 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
D910_03410 | D910_06681 | N6U3I6 | U4U5Z3 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.789 |
D910_03410 | D910_10970 | N6U3I6 | U4UKN9 | Uncharacterized protein. | UDENN domain-containing protein. | 0.523 |
D910_03410 | D910_11206 | N6U3I6 | U4UUT2 | Uncharacterized protein. | Uncharacterized protein. | 0.569 |
D910_03410 | D910_12419 | N6U3I6 | U4UXW8 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.569 |
D910_03602 | D910_03410 | U4TX49 | N6U3I6 | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | Uncharacterized protein. | 0.637 |
D910_03602 | D910_03980 | U4TX49 | U4U2M7 | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.792 |
D910_03602 | D910_04498 | U4TX49 | N6U3V1 | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | Uncharacterized protein. | 0.711 |
D910_03602 | D910_06681 | U4TX49 | U4U5Z3 | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.964 |
D910_03914 | D910_03410 | U4U997 | N6U3I6 | Uncharacterized protein. | Uncharacterized protein. | 0.813 |
D910_03914 | D910_03980 | U4U997 | U4U2M7 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.537 |
D910_03914 | D910_04498 | U4U997 | N6U3V1 | Uncharacterized protein. | Uncharacterized protein. | 0.967 |
D910_03914 | D910_04883 | U4U997 | N6U8U7 | Uncharacterized protein. | Uncharacterized protein. | 0.432 |
D910_03914 | D910_06344 | U4U997 | N6UF97 | Uncharacterized protein. | Uncharacterized protein. | 0.534 |
D910_03914 | D910_06681 | U4U997 | U4U5Z3 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.408 |
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