Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D910_00197 | D910_02701 | U4TRF9 | U4U5N9 | Cache domain-containing protein. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.539 |
D910_00197 | D910_04423 | U4TRF9 | U4U8T2 | Cache domain-containing protein. | Uncharacterized protein. | 0.509 |
D910_00197 | D910_04585 | U4TRF9 | U4UB50 | Cache domain-containing protein. | EF-hand domain-containing protein. | 0.539 |
D910_00197 | D910_07936 | U4TRF9 | N6UAW9 | Cache domain-containing protein. | VWFA domain-containing protein. | 0.892 |
D910_00197 | D910_08700 | U4TRF9 | J3JT88 | Cache domain-containing protein. | MYND-type domain-containing protein. | 0.429 |
D910_00197 | D910_09125 | U4TRF9 | N6TM54 | Cache domain-containing protein. | SH3 domain-containing protein. | 0.730 |
D910_00197 | D910_09883 | U4TRF9 | U4UR78 | Cache domain-containing protein. | Uncharacterized protein. | 0.539 |
D910_00197 | D910_10826 | U4TRF9 | U4UK89 | Cache domain-containing protein. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.539 |
D910_00197 | D910_11560 | U4TRF9 | U4UJK6 | Cache domain-containing protein. | Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. | 0.539 |
D910_02701 | D910_00197 | U4U5N9 | U4TRF9 | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | Cache domain-containing protein. | 0.539 |
D910_02701 | D910_07936 | U4U5N9 | N6UAW9 | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | VWFA domain-containing protein. | 0.539 |
D910_02701 | D910_08174 | U4U5N9 | U4UAA2 | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | VGCC_alpha2 domain-containing protein. | 0.539 |
D910_02701 | D910_09125 | U4U5N9 | N6TM54 | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | SH3 domain-containing protein. | 0.825 |
D910_04423 | D910_00197 | U4U8T2 | U4TRF9 | Uncharacterized protein. | Cache domain-containing protein. | 0.509 |
D910_04423 | D910_07936 | U4U8T2 | N6UAW9 | Uncharacterized protein. | VWFA domain-containing protein. | 0.509 |
D910_04423 | D910_08174 | U4U8T2 | U4UAA2 | Uncharacterized protein. | VGCC_alpha2 domain-containing protein. | 0.509 |
D910_04423 | D910_09125 | U4U8T2 | N6TM54 | Uncharacterized protein. | SH3 domain-containing protein. | 0.824 |
D910_04585 | D910_00197 | U4UB50 | U4TRF9 | EF-hand domain-containing protein. | Cache domain-containing protein. | 0.539 |
D910_04585 | D910_07936 | U4UB50 | N6UAW9 | EF-hand domain-containing protein. | VWFA domain-containing protein. | 0.539 |
D910_04585 | D910_08174 | U4UB50 | U4UAA2 | EF-hand domain-containing protein. | VGCC_alpha2 domain-containing protein. | 0.539 |
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