Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D910_00283 | D910_02444 | U4TPV6 | U4U345 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.471 |
D910_00283 | D910_02446 | U4TPV6 | U4TYD1 | NR LBD domain-containing protein. | SANT domain-containing protein. | 0.471 |
D910_00283 | D910_02915 | U4TPV6 | U4U4H6 | NR LBD domain-containing protein. | Nuclear receptor domain-containing protein. | 0.899 |
D910_00283 | D910_04743 | U4TPV6 | U4U4W0 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.459 |
D910_00283 | D910_06591 | U4TPV6 | U4U837 | NR LBD domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.455 |
D910_00283 | D910_11913 | U4TPV6 | U4UQ51 | NR LBD domain-containing protein. | Nuclear receptor domain-containing protein. | 0.506 |
D910_00283 | D910_12355 | U4TPV6 | U4UXR4 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.429 |
D910_00283 | D910_12356 | U4TPV6 | U4UXK8 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.429 |
D910_02444 | D910_00283 | U4U345 | U4TPV6 | Uncharacterized protein. | NR LBD domain-containing protein. | 0.471 |
D910_02444 | D910_02446 | U4U345 | U4TYD1 | Uncharacterized protein. | SANT domain-containing protein. | 0.617 |
D910_02444 | D910_02915 | U4U345 | U4U4H6 | Uncharacterized protein. | Nuclear receptor domain-containing protein. | 0.471 |
D910_02444 | D910_06591 | U4U345 | U4U837 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.498 |
D910_02444 | D910_11913 | U4U345 | U4UQ51 | Uncharacterized protein. | Nuclear receptor domain-containing protein. | 0.520 |
D910_02446 | D910_00283 | U4TYD1 | U4TPV6 | SANT domain-containing protein. | NR LBD domain-containing protein. | 0.471 |
D910_02446 | D910_02444 | U4TYD1 | U4U345 | SANT domain-containing protein. | Uncharacterized protein. | 0.617 |
D910_02446 | D910_02915 | U4TYD1 | U4U4H6 | SANT domain-containing protein. | Nuclear receptor domain-containing protein. | 0.471 |
D910_02446 | D910_06591 | U4TYD1 | U4U837 | SANT domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.498 |
D910_02446 | D910_11913 | U4TYD1 | U4UQ51 | SANT domain-containing protein. | Nuclear receptor domain-containing protein. | 0.520 |
D910_02915 | D910_00283 | U4U4H6 | U4TPV6 | Nuclear receptor domain-containing protein. | NR LBD domain-containing protein. | 0.899 |
D910_02915 | D910_02444 | U4U4H6 | U4U345 | Nuclear receptor domain-containing protein. | Uncharacterized protein. | 0.471 |
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