STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D910_06576Uncharacterized protein. (503 aa)    
Predicted Functional Partners:
D910_02562
Uncharacterized protein.
      
 0.574
D910_03284
SET domain-containing protein.
      
0.563
D910_09354
WD_REPEATS_REGION domain-containing protein.
    
 0.538
D910_11839
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.530
D910_08071
VEFS-Box domain-containing protein.
    
 0.530
D910_10489
Uncharacterized protein.
   
 0.516
D910_04105
WD_REPEATS_REGION domain-containing protein.
    
 0.491
D910_02613
TPR_REGION domain-containing protein.
    
 0.485
D910_05138
WD_REPEATS_REGION domain-containing protein.
    
 0.479
D910_08773
SET domain-containing protein.
      
 0.449
Your Current Organism:
Dendroctonus ponderosae
NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.