STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06963WGS project CABT00000000 data, contig 2.29. (450 aa)    
Predicted Functional Partners:
SMAC_07928
WGS project CABT00000000 data, contig 2.29.
  
0.999
SMAC_00611
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.985
SMAC_01239
WGS project CABT00000000 data, contig 2.4.
   
 0.906
SMAC_08577
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 0.903
SMAC_02065
WGS project CABT00000000 data, contig 2.18.
     
  0.900
SMAC_00796
WGS project CABT00000000 data, contig 2.2.
  
 0.885
SMAC_07512
WGS project CABT00000000 data, contig 2.7.
    
 0.877
SMAC_00938
WGS project CABT00000000 data, contig 2.2.
   
 0.876
SMAC_00630
WGS project CABT00000000 data, contig 2.1.
    
 0.873
SMAC_00153
Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.
     
 0.837
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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